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Geometric, Electronic Structural Aspects, Stability and Spectroscopic Properties of Ruthenium-octaethylporphyrin complexes of the type Ru[OEP]L2 where L = NPh2, NH3, PH3, AsH3- A DFT Study

Der Pharma Chemica
Journal for Medicinal Chemistry, Pharmaceutical Chemistry, Pharmaceutical Sciences and Computational Chemistry

ISSN: 0975-413X
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Research Article - Der Pharma Chemica ( 2024) Volume 16, Issue 3

Geometric, Electronic Structural Aspects, Stability and Spectroscopic Properties of Ruthenium-octaethylporphyrin complexes of the type Ru[OEP]L2 where L = NPh2, NH3, PH3, AsH3- A DFT Study

Dileep D1, Rajesh R1, Sivasankar BN1 and Krishnamoorthy Bellie Sundaram2*
 
1Department of Chemistry, Government Arts College, Udhagamandalam, Tamil Nadu, India
2Department of Chemistry, PSG College of Arts and Science, Udhagamandalam, Tamil Nadu, India
 
*Corresponding Author:
Krishnamoorthy Bellie Sundaram, Department of Chemistry, PSG College of Arts and Science, Udhagamandalam, Tamil Nadu, India, Email: bskimo@yahoo.co.in

Received: 08-Jan-2024, Manuscript No. DPC-24-138413; Editor assigned: 19-Jan-2024, Pre QC No. DPC-24-138413 (PQ); Reviewed: 02-Feb-2024, QC No. DPC-24-138413; Revised: 17-May-2024, Manuscript No. DPC-24-138413 (R); Published: 14-Jun-2024, DOI: 10.4172/0975-413X.16.3.349-354

Abstract

Ruthenium is an important element with more than one oxidation states which leads to the diverse structural features and wide range of applications of ruthenium complexes. Here we have studied the geometrical, electronic structure, spectral properties and reactivities of important ruthenium octaethylporphyrin complexes with different ligands like N(Ph)2 (1), NH3 (2), PH3 (3) and AsH3 (4), F (5), Cl (6), Br (7), I (8). Density Functional Theory (DFT) calculations at BP86/Def2-TZVP level show that the computed molecular geometries are more stable and their metrical parameters are close to the experimentally available similar complexes. The octahedral geometry around ruthenium with axially disposed ligands in these ruthenium porphyrin complexes 1-4 have been confirmed by theoretical DFT (BP86/Def2-TZVP) investigations. Further the spectroscopic and thermochemical properties of these complexes are also in accordance with expected trend. Interestingly the complexes 5 and 6 are not viable from the FMO analysis. Thus this quantum chemical study can lead to design and find out the better ruthenium-porphyrin complexes with different ligands.

Keywords

Ruthenium; Porphyrin; Spectroscopy; DFT; Reactivity descriptors; Molecular orbital

Introduction

Anticancer agents are main area of research for many of the leading research groups throughout the world. The first of its kind is the success of cisplatin as an effective anticancer agent. Following cis-[PtCl2(NH3)2], many other transition metal complexes as anticancer agents are studied. Photodynamic therapy is an important method now-a-days to treat cancer cells and the method mainly depends on the effective photosensitizer. Among all other transition metal complexes, Ruthenium plays an important role after the first Ruthenium complex TLD1433 as a photosensitizer for Photodynamic Therapy (PDT) in clinical trial in 2017. The structural variation and diverse applications of ruthenium complexes leads to enormous research outputs in the past three decades. Initially it was a great challenge for the ruthenation of porphyrin ring which was reported 50 years before. They have tried this reaction with RuII monocarbonyl complex [Ru(CO)(dmso)5][PF6]2 , resulted in ruthenium-porphyrin complex, but due to the labile dimethyl sulphoxide ligand in the complex, the results were neglected. Recently as a proof of concept, 100% ruthenation of tetraphenylporphyrin, for 30 minutes at 140°C is reported using the Ru3(CO)12 [1]. Porphyrin ligands are also disposed in axial position or in bridging positions in the dimers and trimmers of Ruthenium(II) complexes of RuII(OEP)(CO)(H2PyP3P) (OEP=Octaethylporphyrinato Dianion, H2PyP3P=5-pyridyl-10,15,20-triphenylporphyrinato dianion) and their derivatives [2]. Another important application of ruthenium porphyrins is synthesis of new effective molecular junctions. The Ru-TPPdT [5,15-di(p-thiophenyl)-10,20-diphenylporphinato]ruthenium(II)(py)2, with two thiophenyl groups at meso-positions and two pyridine groups at the axial positions of the Ru(II) porphyrin complex, yielded a reliable configuration between metal electrodes and increased spread in conductance when compared to the parent porphyrin [3]. Recent applications include the efficient photo induced energy transfer in porphyrin and metalloporphyrin based nano materials which shows promising candidates for light harvesting in solar cells and optoelectronics [4]. Many of the present day research are manly based on the implications from the nature and which in turn called as biomimetic. An useful biomemitic study about the functioning of the heme in our human body can be understood by means of biomimetic through modelling. An excellent work of NMR spectroscopic observation on more than hundred thiol ligated ruthenaporphyrin compounds have been reported which can be useful as a model to understand the heme sulphur protein binding interactions [5]. Ruthenation can also be occur at the periphery of the porphyrin ring. The femtosecond dynamics of the cobalt porphyrin with ruthenium bonded in the periphery of porphyrin ring confirm the efficient electrocatalytic property of this complex when compared to that of the non-ruthenated complex [6,7]. Theoretical investigations based on quantum chemical calculations are crucial in analyzing the potential of molecular junctions. For example computational studies on both meso-substituted porphyrines and beta-substituted metllaporphyrines yielded important results [8-12]. Here we have reviewed and studied the geometrical, electronic structure, spectral properties and reactivities of important octaethyl ruthenium-porphyrin complexes with different ligands like N(Ph)2 (1), NH3 (2), PH3 (3) AsH3 (4), F (5) and Cl (6). Computational chemistry tools can aid designing new molecules with expected properties by properly choosing the computational level and metal complexes. DFT methods are already proved to help the complete characterization of the newly synthesized molecules and also to study the molecular orbital interactions [13-19]. Computational chemistry tools like DFT methods are successfully used in the mechanistic investigation also. Ruthenium-porphyrin complex catalyzed aziridination of olefins by aryl azides has been studied using the DFT methods [20]. Ruthenium porphyrin complexes can be designed and their viability can be checked and their applications can be tuned with the help of theoretical calculations. Here DFT methods helped to study the ruthenium-porphyrin complexes with different ligands like N(Ph)2 (1), NH3 (2), PH3 (3), AsH3 (4) F (5), Cl (6), Br (7) and I (8) and to check their viability in laboratory.

Computational details

DFT calculations were carried out using the software ORCA developed by Frank Neese and co-workers [21]. All calculations were performed using the BP86 density functional [22-25] and Def2-TZVP basis set included in the ORCA programme, which is free for academic use. Self-Consistent Field (SCF) calculations were performed using the TIGHTSCF convergence criteria. The geometry optimization was carried out and the resulting geometries are confirmed as minima through the frequency calculations. Pictures of the optimized geometries and the Frontier molecular orbitals are taken using the graphics programme chem craft [26].

Materials and Methods

Ruthenium-porphyrin complexes are already known for their catalytic and biological activities. Che and Huang reviewed the synthesis, characterization, reactivity and catalytic activities of ruthenium-porphyrin complexes [27.] Among all three important oxidation states of ruthenium +2, +3 and +4, the complexes most studied for application purposes are with +3 oxidation state followed by +4. Here we have explored the molecular and electronic structural properties of ruthenim(II)-octaethylporphyrin complexes with different ligands. Ruthenated porphyrin complexes are our main interest in this work whereas porphyrin surrounded by ruthenium complex boxes are also proved to be very good candidates, show very good cytotoxicity towards human Me300 melanoma cells and also successfully used in photodynamic therapy [28]. The molecular structure, electronic features, molecular orbital analysis and the thermo chemistry of these Ruthenium(II)-porphyrin complexes are discussed in the following sub-headings.

Molecular structure

The DFT(BP86/Def2-TZVP) optimized geometries of RuP(NPh2)2, (1), RuP(NH3)2, (2), RuP(PH3)2, (3), RuP(AsH3)2, (4) (where P=Porphyrin) along with their HOMO and LUMO orbitals are provided in the Figures 1 and 2. All the four complexes are having octahedral geometry with ruthenium atom in the centre of the porphyrin ring along the plane with axially disposed NPh2/NH3/PH3/AsH3 ligand. The N-Ru-N bite angle of the six membered rings are all close to 90 degrees. The four ruthenium-nitrogen bond lengths of the porphyrine rings are equal in case of 1, 2 and 4 but there is a difference when the ligand is PPH3 (2.106, 2.106, 2.090, 2.090 Å). The Ru-N distances of the axial ligands in complex 1 are 1.99., 1.990 Å and in complex 2, the bond lengths are 2.128, 2.128 Å. There is a significant increase in Ru-N bonding interaction in complex with NPh2 ligand when compared to that of NH3 ligand. The DFT computed axial Ru-N bond lengths in compound 1 are shorter than that experimentally observed value of 2.1085(19) A0 for the perfluorinated compound [Ru(F20-TPP)(py)2] which possess significant Ru-Npy bonding interaction [29]. Further the ligand NPh2 usually acts as 2e sigma donor and 2e pi donor and the ruthenium also possess vacant d orbital, which lead to the strong Ru-N interaction [30]. The Ru-N bond length with ammonia ligand in compound 2 is closer to the Ru-Npy bond in [Ru(F20-TPP)(py)2]. The Ru-P bond lengths are 2.898, 2.898 Å in complex 3, when comparing the stability of compounds 2 and 3, the phosphine analogue 3 is more stable and the triphenyl phosphine derivative of the Ruthenium-porphyrin complex is experimentally known and synthesized and characterized well before. The disorder associated with the X-ray diffraction data of this triphenyl phosphine derivative has been overcome by computing the geometrical values at DFT (BP86/def2-TZVP) level and the metrical parameters are listed in the Table 1. Though the optimized geometries of the complexes with halogen substituents in their singlet state F (5) and Cl (6) are resulted in minima in the potential energy surface, the viability of these complexes are not feasible from the FMO analysis. But the geometry optimization of these compounds 5-8 in their triplet state show considerable stability with minimum energy structures and >2 eV LUMO-HOMO energy gap. Figure 3 show the DFT (BP86/Def2-TZVP) optimized geometries of halogen substituted compounds 5-8 in their triplet state RuP(F)2, (5), RuP(Cl)2, (6), RuP(Br)2, (7), RuP(I)2, (8) (where P=Porphyrin) (Figures 1-3).

Atoms (Bond length Å; bond angles 0) 1 2 3 4
Ru-Naxial 1.990 [2.1085(19)]15 2.128 [2.1085(19)]15 2.898 2.435
1.99 2.128 2.898; 2.435
Ru-NPorphyrin 2.066 2.052 2.106; 2.067
2.066 2.052 2.09 2.067
N2-Ru1-N4 88.98 90 90.02 90.01
N4-Ru1-N39 90 89.53 90.2 90.22
N5-Ru1-N39 90 90.27 89.76 89.95
N5-Ru1-N3 88.98 90.01 90.02 90.02
N4-Ru1-N5 91.02 89.99 90 89.99
N3-Ru1-N2 91.02 89.99 89.97 89.99
E-Ru-E 180 179.98 179.96 179.95

Table 1. DFT computed bond parameters for the compounds 1-4. RuP(NPh2)2, (1), RuP(NH3)2, (2), RuP(PH3)2, (3), RuP(AsH3)2, (4) (where P=Porphyrin).

Dpc-DFT

Figure 1. DFT (BP86/Def2-TZVP) optimized geometries of compounds 1-4. RuP(NPh2)2, (1), RuP(NH3)2, (2), RuP(PH3)2, (3), RuP(AsH3)2, (4) (where P=Porphyrin).

Dpc-Frontier

Figure 2. Frontier molecular orbital pictures of compounds 1-4 RuP(NPh2)2, (1), RuP(NH3)2, (2), RuP(PH3)2, (3), RuP(AsH3)2, (4) (where P=Porphyrin), obtained from DFT (BP86/Def2-TZVP) optimized geometries.

Dpc-HOMO

Figure 3. HOMO and LUMO of compound 4 in planar and perpendicular view.

Results and Discussion

Electronic structure

The experimental viability of the molecules studied is computed by using the HOMO and LUMO energies as suggested by the Koopmanns’ theorem. When comparing the stability of compounds 1-4, the phosphine analogue 3 is more stable and the triphenyl phosphine derivative of the Ruthenium-porphyrin complex is experimentally known. The DFT computed ELUMO-HOMO value of 2.0 eV confirming this. When comparing the highest occupied molecular orbitals of the molecules 1, 2 and 4 studied, metal d orbitals only involved mainly in all the HOMOs with minimum contribution from porphyrin nitrogen atoms whereas in the complex 3, the electron density is from porphyrin ring only in the HOMO. The lowest unoccupied molecular orbitals are mainly from porphyrin ring. The conceptual density functional terms usually called as reactivity descriptors are tabulated in the Table 3. The descriptors are computed using the Koopmanns’ theorem. From table 3 it is evident that the moldelled compounds 2-4 are more stable than the experimentally known ruthenium octaethylporphyrin compound with axially disposed diphenyl amine ligand. Further compound 2 and 4 possess high global electrophilicity index (Table 2).

Compound 1 2 3 4
HOMO -4.6686 -3.7156 -4.1871 -4.1708
LUMO -3.6114 -2.2085 -2.4177 -2.4043
ELUMO-HOMO 1.0572 1.5071 1.7694 1.7665
Chemical potential (µ) -4.14 -2.9621 -6.6048 -3.2876
Hardness (Ƞ) 0.5286 0.7536 0.8847 0.8833
Softness (S) 1.8918 1.327 1.5 1.1321
Electrophilicity (Ѡ) 16.2123 5.8214 24.6543 6.1181
Ionization potential (eV) 4.6686 3.7156 4.1871 4.1708
Electron affinity (eV) 3.6114 2.2085 2.4177 2.4043

Table 2: DFT computed ELUMO-HOMO energies, chemical potential, hardness, softness, electrophilicity, ionization potential and electron affinity for the compounds 1-4. RuP(NPh2)2, (1), RuP(NH3)2, (2), RuP(PH3)2, (3), RuP(AsH3)2, (4) (where P=Porphyrin).

The DFT computed frontier molecular orbitals of the metal porphyrins compounds are already used successfully for the prediction of electrical conductance and thermo power of beta-substituted metal porphyrin molecular junctions [30]. The carbene transfer and the hydrogen atom transfer reactions of ruthenium porphyrin complexes bearing quinoid carbene groups are reported and proved as successful catalysts [31].

Spectroscopic data

The 1H NMR and 13C NMR chemical shift values are important parameters in assigning the molecular structure of these ruthenium porphyrin complexes. The DFT (BP86/Def2-TZVP) computed 1H NMR and 13C NMR chemical shift values are presented in Table 3. The DFT computed chemical shift values of phenyl carbon atoms attached to nitrogen atoms are highly shielded and resulted in the upfield shift with the chemical shift values of about -168.7 ppm (Table 3). The DFT computed chemical shift values of eight carbon atoms attached to pyrrolinic nitrogen are resonate around -145 (four carbon) and -148 ppm (four carbon) with more shielded nature (Table 3).

1H NMR  chemical shifts 13C NMR chemical shifts
24H -9.608 48H -6.197 4C -145.411 38C -168.722
25H -8.698 55H -2.661 5C -135.656 39C -123.181
26H -8.698 56H -2.661 6C -148.099 40C -123.181
27H -8.973 57H -5.986 7C -134.735 41C -129.323
28H -8.701 58H -5.986 8C -108.339 42C -129.323
29H -8.973 59H -6.197 9C -108.339 43C -125.172
30H -8.973 66H -2.661 10C -134.735 49C -168.722
31H -9.612 67H -2.661 11C -108.261 50C -123.181
32H -8.701 68H -5.986 12C -108.261 51C -123.181
33H -8.973 69H -5.986 13C -135.656 52C -129.323
34H -8.985 70H -6.197 14C -135.656 53C -129.323
35H -8.985 77H -2.661 15C -134.735 54C -125.172
44H -2.661 78H -2.661 16C -145.411 71C -168.722
45H -2.661 79H -2.661 17C -145.411 72C -123.18
46H -5.986 80H -5.986 18C -148.099 73C -123.18
47H -5.986 81H -6.197 19C -148.099 74C -129.323
        20C -134.735 75C -129.323
        21C -145.411 76C -125.172
        22C -135.656 71C -168.722
        23C -148.099    

Table 3: DFT (BP86/Def2-TZVP) computed 1H NMR and 13C NMR chemical shift values (ppm) for the compound RuP(NPh2)2, (1).

DFT (BP86/Def2-TZVP) computations on the ruthenium-porphyrin with halogens F (5), Cl (6) Br (7) and iodine (8), reveal that complexes 5-8 are not showing considerable LUMO-HOMO energy gap when consider as singlet. Whereas they are resulted in more than 2eV LUMO-HOMO energy gap in the triplet state. Ruthenium-porphyrin chemistry is continuously an interesting area of research due to the structural diversity and wider applications [32]. For example, recent synthesis of seven coordinated ruthenium iodosylbenzene complex is highly reactive and used for oxygen atom transfer and C-H bond activation reactions (Figure 4).

Dpc-geometries

Figure 4. DFT (BP86/Def2-TZVP) optimized geometries of halogen substituted compounds 5-8 in their triplet state RuP(F)2, (5), RuP(Cl)2, (6), RuP(Br)2, (7), RuP(I)2, (8) (where P=Porphyrin).

Conclusion

Density Functional Theory calculations were carried out on the ruthenium-porphyrin compounds RuP[N(Ph)2]2 (1), RuP(NH3)2 (2), RuP(PH3)2 (3) and RuP(AsH3)2 (4) to study their geometrical and electronic structural features, stability and spectroscopic properties. The following conclusions were drawn from the present study: Our DFT computations confirm that the stability of these compounds mainly governed by two factors viz., steric factor of the ligand and electronic factor of the porphyrin ring. DFT calculations using ORCA at BP86/def2-TZVP level predict the structural parameters for the compound RuP[N(Ph)2]2 (1), are in good agreement with the experimental values. DFT-optimized geometries for the compounds RuP(NH3)2 (2), RuP(PH3)2 (3) and RuP(AsH3)2 (4) resulted in minima in the potential energy surface and the bond parameters are in good agreement with the experimental values of similar compounds. The DFT computed geometries suggesting the possible synthesis of compounds 2-4. DFT computed energetics is really useful in ascertaining the stability of the compounds 1-4 studied. The DFT computed ELUMO-HOMO value of 2.0 eV of the compounds suggests the more stable nature and the viability of the modelled compounds 2-4 when compared to that of experimentally reported ruthenium-porphyrin with diphenyl amine ligand 1. The 1H and 13C, NMR chemical shifts computed at DFT (BP86/Def2-TZVP) level are in close agreement with the experimentally observed values for clusters 1. The DFT computed 1H, 13C NMR and 11B NMR chemical shift values also supporting the octahedral geometries of these ruthenium-porphyrin compounds with axially disposed N(Ph)2 (1), NH3 (2), PH3 (3) and AsH3 (4) ligands. DFT-optimized geometries and the computed 1H and 13C NMR chemical shift values are very useful in successfully assigning the number and position of the hydrogens and carbon atoms of clusters 1-4. Though the optimized geometries of the complexes with halogen substituents in the singlet state, F (5), Cl (6), Br (7) and I (8) are resulted in minima in the potential energy surface, the viability of these complexes are not feasible from the FMO analysis. Interestingly, the halogen substituted ruthenium porphyrin complexes 5-8 are showing considerable (>2 eV) LUMOHOMO energy gap in their triplet state. Since the importance of the ruthenium porphyrine compounds as photosensitizers in photodynamic therapy for cancer and also in photo catalysis have been revealed already, the modeled compounds could be synthesized in laboratory and might show potential applications.

Conflicts of Interest

The authors declare no conflicts of interest.

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